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Interactive chemistry simulations and animations

Chemistry deals with substances at the scale of atoms and molecules, far below what the eye can see. Because the behaviour of particles, bonds and reactions is invisible in an ordinary laboratory, interactive simulations and animations have become common teaching aids. They render abstract ideas — the arrangement of electrons in an atom, the three-dimensional shape of a molecule, or the rearrangement of bonds during a reaction — as moving, manipulable pictures.

Such resources cover a broad range of introductory topics. Animations of atomic structure show electrons occupying shells or orbitals around a nucleus. Molecular model viewers display the geometry of compounds, letting a learner rotate a structure to see bond angles and spatial arrangement. Reaction animations depict how reactants collide and form products, while simulations of states of matter illustrate how particles move differently in solids, liquids and gases. Other tools handle organic molecules, acids and bases, electrochemistry, and the patterns of the periodic table.

The educational value lies in making processes visible that a static textbook diagram cannot convey. A simulation can vary temperature, concentration or pressure and show the result immediately, helping connect a chemical equation to the physical events it represents. Many were originally built as Java applets; because web browsers have phased out Java support, comparable simulations are now distributed as HTML5 or JavaScript programs that run directly in modern browsers.

Frequently asked questions

What can a chemistry animation show that a textbook cannot?
It can show motion and change over time — particles colliding, bonds breaking and forming, or a molecule rotating in three dimensions — which static diagrams cannot represent.
Why were many of these tools written as Java applets?
Java once allowed interactive programs to run inside a web page across different computers. Browsers have since dropped applet support, so newer simulations use HTML5 and JavaScript instead.
What chemistry topics are commonly simulated?
Atomic structure, molecular geometry, chemical reactions, states of matter, acids and bases, gas laws and electrochemistry are among the most frequently animated subjects.




Chemistry java applets and animations:    
Acids and Bases Chemistry: overview Gas Laws Organic chemistry
Atoms, crystals & molecules Electrochemistry General chemistry  

Chemistry animations and java applets,  movies and software 
Animated Chemistry Tutorials and Models Phase Diagram, Heating/Cooling Curve, Atomic Orbitals, Hybridization, Water, Main Group Hydrides, Main Group Halides, Main Group Acids, Anions and Oxygen Compounds, Organic Compounds, Diatomic Molecules
Biochemistry interactive java experiments a collection of java applets
ChemCollective: Virtual Lab Chemistry Virtual Lab Simulator
Chemconnections
Chemistry animations Flash animations
Chemistry animations Chemistry-Based QuickTime and Flash Movies, Animations, and Streaming Audio
Chemistry animations
Chemistry Experiments and Exercises Chemistry Experiments and Exercises, Atomic Structure, Atomic Orbitals, Hybrid Orbitals, Chemical Analysis, Elemental Analysis, Spectrophotometry, Chemical Bonding, Hybrid Orbitals, Molecular Orbitals, Chemical Equilibria, Chemical Equilibria, Chemical Kinetics, Chemical Kinetics, Crystal Structure, Closest-Packed Structures, Structure of Solids, Unit Cells, Gases, Gas Laws, Kinetic Molecular Theory, Phase Changes, Phase Changes, Thermodynamics, Calorimetry
Chemistry Animations And PowerPoints
Chemistry interactive tools animated files, 3D molecular models that you can manipulate to view various perspectives, movies
Chemistry Learning Tools visualize how to determine the Lewis Structure of more than 60 molecules, how to interpret the Lewis structure in terms of valence shell electron pair repulsion (VSEPR) theory and how to interpret the Lewis structure in terms of valence bond (VB) theory, visualize more than 50 common organic reactions and concepts, ...
Chemputer interactive calculators for chemistry: isotope patterns, element percentages, reaction yields, oxidation state of d-block metals in a complex, electron accountancy for metals in a complex, classification of an atom in a compound
Computer graphics scientific visualization of chemical structures and atomic orbitals presented as QuickTime and MPEG movies
Demonstration movie sheets
Equation software in Java for the internet online java calculator in java, looks like mathcad (also chemistry calculator)
General, organic and biochemistry organic and biochemistry animations, mov files
Interactive Science Simulations a tip
Java 3D molecular viewer metal, protein, metalloprotein, protein design, molecular biology, metalloenzyme, metalloantibody
Java programs for physical chemistry the irYdium project
Mathmol interactive textbook water module, molecular modeling, interactive molecules, library of 3D molecules, java applets, a tip
Molecular visualization freeware software for looking at macromolecular structure and its relation to function
Organic chemistry movies Orbitals, Representing Compounds, Alkane Physical Properties, Cycloalkanes, What is a dihedral angle? Stereochemistry, Carbocationic Rearrangements, Computational Chemistry, SN1 vs. SN2, Pinacol Rearrangement, Mass Spectrometry, Electrophilic Aromatic Substitution, Aldehydes and Ketones, Enolates, alpha, beta-Unsaturated Carbonyls, Amines
Organic Reaction Mechanisms
Virtual Lab Simulator Virtual Lab Simulator

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